Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G025000 hypothetical protein AT4G26410:AT4G26410:chromosome-associated kinesin 0
Glyma.20G025200 hypothetical protein AT3G13400:sks13:SKU5 similar 13 0
Glyma.20G025300 hypothetical protein NA 0
Glyma.20G025400 hypothetical protein AT2G03667:AT2G03667:Asparagine synthase family protein 0
Glyma.20G025600 hypothetical protein AT2G03510:AT2G03510:SPFH/Band 7/PHB domain-containing membrane-associated protein family 0
Glyma.20G025800 hypothetical protein AT1G13830:AT1G13830:Carbohydrate-binding X8 domain superfamily protein 0
Glyma.20G025900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 0
Glyma.20G026200 hypothetical protein NA 0
Glyma.20G026400 hypothetical protein AT1G26570:UGD1:UDP-glucose dehydrogenase 1 0
Glyma.20G026500 hypothetical protein AT1G26580:AT1G26580:ELM2 domain protein__AT2G03470:AT2G03470:ELM2 domain-containing protein 0