Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G025000 hypothetical protein AT4G26410:AT4G26410:chromosome-associated kinesin 0
Glyma.20G025200 hypothetical protein AT3G13400:sks13:SKU5 similar 13 0
Glyma.20G025300 hypothetical protein NA 0
Glyma.20G025400 hypothetical protein AT2G03667:AT2G03667:Asparagine synthase family protein 0
Glyma.20G025600 hypothetical protein AT2G03510:AT2G03510:SPFH/Band 7/PHB domain-containing membrane-associated protein family 0
Glyma.20G025800 hypothetical protein AT1G13830:AT1G13830:Carbohydrate-binding X8 domain superfamily protein 0
Glyma.20G025900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 0
Glyma.20G026200 hypothetical protein NA 0
Glyma.20G026400 hypothetical protein AT1G26570:UGD1:UDP-glucose dehydrogenase 1 0
Glyma.20G026500 hypothetical protein AT1G26580:AT1G26580:ELM2 domain protein__AT2G03470:AT2G03470:ELM2 domain-containing protein 0