Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G022100 hypothetical protein NA 0
Glyma.20G022300 hypothetical protein AT3G46570:AT3G46570:Glycosyl hydrolase superfamily protein 0
Glyma.20G022600 hypothetical protein AT2G04340:AT2G04340:cytoplasmic dynein 2 light intermediate chain 0
Glyma.20G022700 hypothetical protein NA 0
Glyma.20G022800 hypothetical protein AT3G05320:AT3G05320:O-fucosyltransferase family protein 0
Glyma.20G022900 hypothetical protein AT1G31290:AGO3:ARGONAUTE 3__AT1G31280:AGO2:Argonaute family protein 0
Glyma.20G023000 hypothetical protein NA 0
Glyma.20G023100 Pentatricopeptide repeat-containing protein At4g18520, chloroplastic AT4G18520:AT4G18520:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G023200 hypothetical protein NA 0
Glyma.20G023300 hypothetical protein NA 0