Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G019200 hypothetical protein AT2G15430:NRPB3:DNA-directed RNA polymerase family protein 0
Glyma.20G019400 hypothetical protein AT5G18820:Cpn60alpha2:TCP-1/cpn60 chaperonin family protein 0
Glyma.20G019600 hypothetical protein NA 0
Glyma.20G020000 hypothetical protein AT1G11880:AT1G11880:transferases, transferring hexosyl groups 0
Glyma.20G020100 hypothetical protein AT4G19900:AT4G19900:alpha 1,4-glycosyltransferase family protein 0
Glyma.20G020200 hypothetical protein NA 0
Glyma.20G020300 hypothetical protein AT5G45020:AT5G45020:Glutathione S-transferase family protein__AT4G19880:AT4G19880:Glutathione S-transferase family protein__AT5G44990:AT5G44990:Glutathione S-transferase family protein 0
Glyma.20G020400 hypothetical protein AT2G35155:AT2G35155:Trypsin family protein__AT5G45030:AT5G45030:Trypsin family protein 0
Glyma.20G020500 hypothetical protein NA 0
Glyma.20G020600 hypothetical protein AT5G45040:CYTC6A:Cytochrome c 0