Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G019200 hypothetical protein AT2G15430:NRPB3:DNA-directed RNA polymerase family protein 0
Glyma.20G019400 hypothetical protein AT5G18820:Cpn60alpha2:TCP-1/cpn60 chaperonin family protein 0
Glyma.20G019600 hypothetical protein NA 0
Glyma.20G020000 hypothetical protein AT1G11880:AT1G11880:transferases, transferring hexosyl groups 0
Glyma.20G020100 hypothetical protein AT4G19900:AT4G19900:alpha 1,4-glycosyltransferase family protein 0
Glyma.20G020200 hypothetical protein NA 0
Glyma.20G020300 hypothetical protein AT5G45020:AT5G45020:Glutathione S-transferase family protein__AT4G19880:AT4G19880:Glutathione S-transferase family protein__AT5G44990:AT5G44990:Glutathione S-transferase family protein 0
Glyma.20G020400 hypothetical protein AT2G35155:AT2G35155:Trypsin family protein__AT5G45030:AT5G45030:Trypsin family protein 0
Glyma.20G020500 hypothetical protein NA 0
Glyma.20G020600 hypothetical protein AT5G45040:CYTC6A:Cytochrome c 0