Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G019200 hypothetical protein AT2G15430:NRPB3:DNA-directed RNA polymerase family protein 0
Glyma.20G019400 hypothetical protein AT5G18820:Cpn60alpha2:TCP-1/cpn60 chaperonin family protein 0
Glyma.20G019600 hypothetical protein NA 0
Glyma.20G020000 hypothetical protein AT1G11880:AT1G11880:transferases, transferring hexosyl groups 0
Glyma.20G020100 hypothetical protein AT4G19900:AT4G19900:alpha 1,4-glycosyltransferase family protein 0
Glyma.20G020200 hypothetical protein NA 0
Glyma.20G020300 hypothetical protein AT5G45020:AT5G45020:Glutathione S-transferase family protein__AT4G19880:AT4G19880:Glutathione S-transferase family protein__AT5G44990:AT5G44990:Glutathione S-transferase family protein 0
Glyma.20G020400 hypothetical protein AT2G35155:AT2G35155:Trypsin family protein__AT5G45030:AT5G45030:Trypsin family protein 0
Glyma.20G020500 hypothetical protein NA 0
Glyma.20G020600 hypothetical protein AT5G45040:CYTC6A:Cytochrome c 0