Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G008900 hypothetical protein AT1G49490:AT1G49490:Leucine-rich repeat (LRR) family protein__AT3G19020:AT3G19020:Leucine-rich repeat (LRR) family protein 0
Glyma.20G009000 hypothetical protein NA 0
Glyma.20G009100 hypothetical protein AT5G48880:KAT5:peroxisomal 3-keto-acyl-CoA thiolase 2 0
Glyma.20G009200 hypothetical protein AT2G15860:AT2G15860:BAT2 domain protein 0
Glyma.20G009400 hypothetical protein AT2G19940:AT2G19940:Putative N-acetyl-gamma-glutamyl-phosphate reductase 0
Glyma.20G009500 hypothetical protein AT1G49510:emb1273:embryo defective 1273 0
Glyma.20G009600 hypothetical protein AT4G33950:OST1:Protein kinase superfamily protein 0
Glyma.20G009800 hypothetical protein AT1G49560:AT1G49560:Homeodomain-like superfamily protein 0
Glyma.20G009900 hypothetical protein NA 0
Glyma.20G010000 hypothetical protein AT2G15780:AT2G15780:Cupredoxin superfamily protein 0