Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06381 6',7'-Dihydroxybergamottin 372.1547 373.1621 162
P06792 Myo-inositol glutamate 323.0859 324.0925 162
P10166 Demeton-O 258.0513 259.0583 162
P11723 Isomagnolol 266.1356 267.1438 162
P14158 Physalien 650.1559 651.1582 162
P21337 3-(9-Adeninyl)propionic acid. 207.0794 208.0868 162
P32513 Cefbuperazone 627.1640 628.1696 162
P41353 Deoxyharringtonine 515.2462 516.2526 162
P41829 Renieramycin R 605.2383 606.2458 162
P49182 Noberastine 311.1785 312.1827 162

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G021700 hypothetical protein NA 258
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 256
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 256
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 256
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 256
Glyma.18G267500 hypothetical protein NA 254
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 252
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 251
Glyma.16G138800 hypothetical protein NA 251
Glyma.16G208400 hypothetical protein NA 249