Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12624 Dillapional 236.0693 237.0750 107
P13391 1-(Indol-3-yl)propanol 3-phosphate 255.0623 256.0689 107
P14295 119.0438 120.0517 107
P14540 2-Propylphenol 136.0876 137.0944 107
P15095 Tryptophyl-Lysine 332.1868 333.1906 107
P18177 4-Amino-5-chloro-N-[(3S,4R)-1-[3-(4-fluorophenoxy)propyl]-3-methoxypiperidin-4-yl]-2-hydroxybenzamide 451.1639 452.1709 107
P24091 Folimine 219.0916 220.0996 107
P25220 methyl 5S,6S-diacetoxy-9-oxo-10-chloro-12R-hydroxy-7E,10E,14Z,17Z-prostatetraenoate-cyclo[8,12R] 496.1890 497.1956 107
P27435 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0977 155.1056 107
P30791 559.1473 560.1513 107

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G021700 hypothetical protein NA 258
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 256
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 256
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 256
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 256
Glyma.18G267500 hypothetical protein NA 254
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 252
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 251
Glyma.16G138800 hypothetical protein NA 251
Glyma.16G208400 hypothetical protein NA 249