Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09995 Daphniyunnine D 341.2004 342.2073 167
P10528 Etoperidone 377.1934 378.2001 167
P18446 1080.3689 1081.3767 167
P22504 Swietenidin B 205.0736 206.0805 167
P30111 Trifoliolasine D 783.2994 784.3081 167
P30296 1006.3388 1007.3447 167
P35381 898.3478 899.3586 167
P38138 Semapimod 744.4382 745.4471 167
P41379 11-Hydroxy-9-tridecenoic acid 228.1769 229.1859 167
P43251 Auriculatin 420.1577 421.1647 167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G106700 hypothetical protein NA 268
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 268
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 264
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 264
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 263
Glyma.02G303600 hypothetical protein NA 262
Glyma.02G303700 hypothetical protein NA 262
Glyma.13G184500 hypothetical protein NA 260
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 258
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 258