Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07022 Melrosin A 476.1705 477.1753 106
P10935 Acorafloxacin 419.1693 420.1730 106
P11923 Tyr-Val-Ala-Asp-chloromethyl ketone 498.1859 499.1895 106
P13185 N-Acetyl-serylaspartic acid 262.0810 263.0892 106
P16218 905.4256 906.4362 106
P16647 Loquatoside 438.1138 439.1203 106
P16934 405.5674 406.5711 106
P17618 Isopropyl phenylacetate 178.0981 179.1063 106
P17737 4'-Hydroxy-4-(4-hydroxystyryl)-7-methoxyflavan 374.1455 375.1552 106
P18372 N-Acetylphenylalanine beta-naphthyl ester 333.1364 334.1448 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G106700 hypothetical protein NA 268
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 268
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 264
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 264
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 263
Glyma.02G303600 hypothetical protein NA 262
Glyma.02G303700 hypothetical protein NA 262
Glyma.13G184500 hypothetical protein NA 260
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 258
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 258