Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P47541 | 3R-hydroxy-14R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-pentadecanoic acid | 547.3248 | 548.3360 | 133 |
| P49951 | (6E,8E,10R,12Z)-10-Hydroxy-3-oxooctadecatrienoic acid | 308.2041 | 309.2129 | 133 |
| P52735 | Cypendazole | 329.1478 | 330.1538 | 133 |
| P00905 | Metiazinic acid | 271.0675 | 272.0757 | 132 |
| P02658 | 5,7,3',4',5'-Pentahydroxyflavanone | 304.0541 | 305.0611 | 132 |
| P02741 | Parbendazole | 247.1324 | 248.1384 | 132 |
| P04385 | 5-Hydroxy-3,4,7-triphenyl-2,6-benzofurandione | 392.1077 | 393.1155 | 132 |
| P05960 | 559.1606 | 560.1669 | 132 | |
| P07338 | Cedpht | 304.1446 | 305.1509 | 132 |
| P07617 | Nitrogen mustard | 155.0286 | 156.0359 | 132 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.20G109000 | hypothetical protein | AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein | 281 | |
| Glyma.13G185400 | hypothetical protein | NA | 279 | |
| Glyma.10G079700 | hypothetical protein | AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family | 277 | |
| Glyma.18G073500 | hypothetical protein | AT3G44730:KP1:kinesin-like protein 1 | 275 | |
| Glyma.16G115800 | hypothetical protein | NA | 274 | |
| Glyma.04G082800 | hypothetical protein | NA | 273 | |
| Glyma.02G006500 | hypothetical protein | AT4G01660:ABC1:ABC transporter 1 | 270 | |
| Glyma.03G035400 | hypothetical protein | AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein | 269 | |
| Glyma.20G099200 | hypothetical protein | AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 component | 269 | |
| Glyma.11G241300 | hypothetical protein | AT4G39990:RABA4B:RAB GTPase homolog A4B | 268 |