Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40970 4,4-Difluoro-17beta-hydroxy-17alpha-methyl-androst-5-en-3-one 338.2072 339.2142 108
P41385 Orthosiphol V 572.2605 573.2685 108
P41504 669.8372 670.8457 108
P41893 1097.0422 1098.0522 108
P45137 Fluvirucin B4 603.4174 604.4235 108
P48341 194.5816 390.1713 108
P48752 Apronal 184.1230 369.2500 108
P48759 257.1835 258.1908 108
P51031 3beta-Acetoxy-8beta,15-dihydroxy-ent-labda-13E-ene 366.2795 367.2858 108
P00856 514.0622 515.0678 107

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 281
Glyma.13G185400 hypothetical protein NA 279
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 277
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 275
Glyma.16G115800 hypothetical protein NA 274
Glyma.04G082800 hypothetical protein NA 273
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 270
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 269
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 component 269
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 268