Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30276 893.4290 894.4326 111
P41896 570.7384 571.7441 111
P42275 N-Stearoyl Aspartic acid 399.2945 400.3028 111
P42557 Morantel 220.1039 221.1110 111
P49545 (1beta,3beta,5beta)-1,3,5-[(1R)-ethylidynetris(oxy)]-14beta,16beta-dihydroxy-19oxo-bufa-20,22-dienolide 472.2004 473.2076 111
P49596 3-O-(Z)-Coumaroyl beta-amyrin 572.4270 573.4323 111
P05421 Cycloclinacoside A1 298.0725 299.0783 110
P05447 Glutamylphenylalanine 294.1220 295.1276 110
P07384 Islatravir 293.0919 294.0977 110
P14764 Proglumetacin 843.3920 844.3957 110

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 281
Glyma.13G185400 hypothetical protein NA 279
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 277
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 275
Glyma.16G115800 hypothetical protein NA 274
Glyma.04G082800 hypothetical protein NA 273
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 270
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 269
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 component 269
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 268