Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 298
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 296
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 296
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II subunit gamma, putative (DUF3741) 292
Glyma.17G092800 hypothetical protein NA 291
Glyma.17G217900 hypothetical protein NA 284
Glyma.02G295900 hypothetical protein NA 282
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 282
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 282
Glyma.07G068600 hypothetical protein NA 281