Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P14703 Dillapional 236.0658 237.0736 195
P30058 Koraiol 222.1951 223.2018 195
P12116 o-Methylacetophenone 134.0716 135.0790 194
P16820 Petunidin 3-(6''-malonylglucoside) 564.1095 565.1176 194
P28303 Nannochelin B 754.3070 755.3117 194
P37556 807.4435 808.4480 194
P41491 677.8221 678.8305 194
P01926 Hyacinthacine A4 187.1208 188.1264 193
P06218 Repaglinide 452.2673 453.2779 193
P08723 (2R,3R,5R)-2-(S-Pantetheinyl)-carbapenam-3-carboxylate 431.1720 432.1820 193

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 298
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 296
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 296
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II subunit gamma, putative (DUF3741) 292
Glyma.17G092800 hypothetical protein NA 291
Glyma.17G217900 hypothetical protein NA 284
Glyma.02G295900 hypothetical protein NA 282
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 282
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 282
Glyma.07G068600 hypothetical protein NA 281