Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11356 6-O-Acetylscutehenanine A 495.2297 496.2346 118
P14899 Mopidralazine 273.1588 274.1671 118
P15486 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1086 503.1184 118
P15867 Symlandine 381.2110 382.2174 118
P15915 Methionine sulfone 181.0438 182.0519 118
P17609 N,N-Didesmethyltramadol 235.1563 236.1631 118
P20973 SB 243213 428.1449 429.1530 118
P28706 Stemphyloxin I 382.2320 383.2393 118
P29385 Acarbose 645.2529 646.2627 118
P29481 TRIPARANOL 437.2060 438.2140 118

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 2,735
Glyma.06G313500 hypothetical protein NA 2,699
Glyma.10G081700 hypothetical protein NA 2,676
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 2,676
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 2,671
Glyma.12G114900 hypothetical protein NA 2,671
Glyma.12G108600 hypothetical protein NA 2,658
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2,658
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2,619
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 2,611