Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01325 7-Methoxymurrayacine 307.1223 308.1298 149
P07302 Melampyroside 450.1506 451.1589 149
P09071 888.1557 889.1645 149
P10311 2'-Cinnamoylsalicortin 554.1802 555.1831 149
P10689 1-(Pentafluorophenyl)propane 210.0480 211.0541 149
P14001 Quetiapine Sulfoxide 399.1540 400.1606 149
P16545 Sulfisomidine 278.0841 279.0918 149
P16940 5-Methylthiopentyldesulfoglucosinolate 355.1126 356.1217 149
P17252 Riddelliine N-oxide 365.1502 366.1570 149
P25789 10-Isovaleryl kanokoside C 722.3032 723.3071 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G145200 hypothetical protein NA 303
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 302
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 302
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 302
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 302
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 302
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 302
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 299
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 299
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 298