Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54679 357.7333 358.7417 —
P54683 Neoacrimarine D 635.2497 636.2567 —
P54688 2,7-Dideacetyltaxuspine X 682.2954 683.3041 —
P54690 2-(Dimethylamino)acetonitrile 84.0681 85.0754 —
P54692 200.9661 201.9741 —
P54697 160.9610 161.9683 —
P54698 7-O-Acetylpseurata C 432.2164 433.2204 —
P54703 695.3327 696.3404 —
P54706 663.2964 664.3060 —
P54707 Briarlide E 636.2757 637.2796 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G145200 hypothetical protein NA 303
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 302
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 302
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 302
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 302
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 302
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 302
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 299
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 299
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 298