Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01733 4'-N-desmethylolanzapine 298.1240 299.1299 124
P04560 17-dimethylarsinoyl-9Z-heptadecenoic acid 388.1968 389.1998 124
P05426 337.6692 338.6757 124
P10564 11-Isopropylcryptolepine 274.1514 275.1575 124
P11201 2-Methoxybenzoic acid 152.0461 153.0537 124
P11527 S-(2-Chloroethyl)glutathione 369.0774 370.0842 124
P14200 Edulisin V 428.1866 429.1918 124
P18929 Deptropine 333.2119 334.2186 124
P20132 Thymidine 3',5'-cyclic monophosphate 304.0457 305.0527 124
P23365 Desloratadine 310.1238 311.1277 124

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G145200 hypothetical protein NA 303
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 302
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 302
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 302
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 302
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 302
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 302
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 299
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 299
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 298