Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31330 Arginine chloride 192.0780 193.0844 125
P42656 605.7500 606.7519 125
P44609 1-Acetoxy-3,15-epoxygymnomitrane 278.1877 279.1947 125
P47637 90.0461 91.0533 125
P47673 90.0465 91.0540 125
P48236 N-Palmitoyl Glutamic acid 385.2787 386.2871 125
P49106 Prodiamine 350.1210 351.1290 125
P50486 5-oxo-7-(S-glutathionyl)-8Z,11Z,14Z-eicosatrienoic acid 597.2751 598.2818 125
P53413 Tetradecyl nicotinate 319.2477 320.2545 125
P00779 2-Methylthio-N6-(delta2-isopentenyl)adenosine 381.1432 382.1491 124

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G145200 hypothetical protein NA 303
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 302
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 302
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 302
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 302
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 302
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 302
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 299
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 299
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 298