Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P23848		475.0555	476.0632	133
P25001	Leukotriene C5	623.2954	624.3016	133
P29543	Aristoloterpenate II	527.1907	528.1979	133
P30895	1-(6Z,9Z,12Z-octadecatrienoyl)-glycero-3-phosphoserine	519.2627	520.2710	133
P30962	Spongothymidine	258.0832	259.0902	133
P37482	Pomalidomide	273.0701	274.0768	133
P39497	alpha-Zearalenol	320.1584	321.1667	133
P42354		1044.2354	1045.2401	133
P42759	Resorcinol	110.0355	111.0433	133
P45429		631.2839	632.2928	133

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.18G111800		hypothetical protein	AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein	308
Glyma.02G091800		hypothetical protein	NA	307
Glyma.13G170600	ALDH2B6	aldehyde dehydrogenase family 2 member B6	AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7	307
Glyma.15G140400		hypothetical protein	NA	307
Glyma.18G298800		hypothetical protein	NA	307
Glyma.11G161900		hypothetical protein	NA	306
Glyma.19G150000		hypothetical protein	AT3G58060:AT3G58060:Cation efflux family protein	306
Glyma.16G180000		hypothetical protein	NA	305
Glyma.07G069400		hypothetical protein	AT2G46020:BRM:transcription regulatory protein SNF2	303
Glyma.16G019400	SHAT1-5	NAC domain-containing protein 43-like	NA	303