Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43814 Tetradeca-6,9,12-trienedioylcarnitine 395.2323 396.2414 107
P49916 Xenortide A 409.2673 410.2756 107
P49933 Senbusine A 423.2591 424.2675 107
P54867 605.9887 606.9963 107
P01520 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0615 140.0689 106
P01943 Diethylthiophosphoric acid 170.0187 171.0271 106
P02335 Chloroxine 212.9710 213.9777 106
P03819 2,3-Dihydro-2,3-dihydroxy-9-phenyl-1H-phenalen-1-one 290.0966 291.1043 106
P04725 Firocoxib 336.1053 337.1106 106
P06531 4-Anilino-4-oxobutanoic acid 193.0736 194.0795 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 308
Glyma.02G091800 hypothetical protein NA 307
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 307
Glyma.15G140400 hypothetical protein NA 307
Glyma.18G298800 hypothetical protein NA 307
Glyma.11G161900 hypothetical protein NA 306
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 306
Glyma.16G180000 hypothetical protein NA 305
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 303
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 303