Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P05722 (-)-Echinobetaine A 175.1198 176.1263 111
P06706 Nitrazine 233.1234 234.1308 111
P06915 682.1883 683.1935 111
P08742 153.0759 154.0846 111
P09330 Aclatonium 217.1286 218.1356 111
P09922 Voxelotor 337.1410 338.1475 111
P11202 577.1808 578.1882 111
P11491 Kaempferol 7,4'-dimethyl ether 3-O-sulfate 394.0315 395.0366 111
P11603 HC 70III 455.2224 456.2292 111
P12384 2-(4-methoxyphenyl)ethanol 152.0846 153.0919 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 308
Glyma.02G091800 hypothetical protein NA 307
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 307
Glyma.15G140400 hypothetical protein NA 307
Glyma.18G298800 hypothetical protein NA 307
Glyma.11G161900 hypothetical protein NA 306
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 306
Glyma.16G180000 hypothetical protein NA 305
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 303
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 303