Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P06071	Proteacin	473.1514	474.1552	216
P23606		981.3248	982.3265	216
P25233	Ligujapone	202.1001	203.1075	216
P34921	Xyloccensin O	700.2387	701.2457	216
P52079	(3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine	204.1493	205.1577	216
P08763		831.2168	832.2238	215
P36727	Cyclopentenyl propionate musk	264.2057	265.2136	215
P40346		570.1408	571.1471	215
P48063		203.5863	204.5948	215
P52212	2-Chloro-N-icosa-5,8,11,14-tetraenylacetamide	365.2460	366.2546	215

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.18G111800		hypothetical protein	AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein	308
Glyma.02G091800		hypothetical protein	NA	307
Glyma.13G170600	ALDH2B6	aldehyde dehydrogenase family 2 member B6	AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7	307
Glyma.15G140400		hypothetical protein	NA	307
Glyma.18G298800		hypothetical protein	NA	307
Glyma.11G161900		hypothetical protein	NA	306
Glyma.19G150000		hypothetical protein	AT3G58060:AT3G58060:Cation efflux family protein	306
Glyma.16G180000		hypothetical protein	NA	305
Glyma.07G069400		hypothetical protein	AT2G46020:BRM:transcription regulatory protein SNF2	303
Glyma.16G019400	SHAT1-5	NAC domain-containing protein 43-like	NA	303