Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P00912 | N-(2,3-Dihydroxypropyl)valine | 191.1128 | 192.1199 | 191 |
| P07366 | O-Phospho-L-serine | 185.0125 | 186.0199 | 191 |
| P08205 | 317.1091 | 318.1156 | 191 | |
| P13178 | Velamolone acetate | 358.2164 | 359.2240 | 191 |
| P16022 | 5-Hydroxydec-7-enoylcarnitine | 329.2253 | 330.2343 | 191 |
| P16111 | Carboxyfluorescein diacetate | 531.1667 | 532.1727 | 191 |
| P28396 | PC(2:0/20:5(6E,8Z,11Z,14Z,17Z)-OH(5)) | 599.3173 | 600.3250 | 191 |
| P29772 | Ecadotril | 385.1363 | 386.1428 | 191 |
| P38440 | 542.2658 | 543.2746 | 191 | |
| P43463 | PGP(18:1(9Z)/20:4(6E,8Z,11Z,13E)-2OH(5S,15S)) | 908.4845 | 909.4939 | 191 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.16G160900 | hypothetical protein | NA | 322 | |
| Glyma.01G234100 | hypothetical protein | AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein | 321 | |
| Glyma.01G173900 | hypothetical protein | NA | 320 | |
| Glyma.06G183500 | hypothetical protein | AT5G50000:AT5G50000:Protein kinase superfamily protein | 320 | |
| Glyma.03G035500 | hypothetical protein | NA | 318 | |
| Glyma.02G044600 | hypothetical protein | NA | 316 | |
| Glyma.09G187700 | hypothetical protein | AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein | 314 | |
| Glyma.06G190300 | hypothetical protein | AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) | 310 | |
| Glyma.16G189000 | hypothetical protein | NA | 308 | |
| Glyma.18G055400 | hypothetical protein | NA | 308 |