Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07022 Melrosin A 476.1705 477.1753 106
P10935 Acorafloxacin 419.1693 420.1730 106
P11923 Tyr-Val-Ala-Asp-chloromethyl ketone 498.1859 499.1895 106
P13185 N-Acetyl-serylaspartic acid 262.0810 263.0892 106
P16218 905.4256 906.4362 106
P16647 Loquatoside 438.1138 439.1203 106
P16934 405.5674 406.5711 106
P17618 Isopropyl phenylacetate 178.0981 179.1063 106
P17737 4'-Hydroxy-4-(4-hydroxystyryl)-7-methoxyflavan 374.1455 375.1552 106
P18372 N-Acetylphenylalanine beta-naphthyl ester 333.1364 334.1448 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G160900 hypothetical protein NA 322
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 321
Glyma.01G173900 hypothetical protein NA 320
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 320
Glyma.03G035500 hypothetical protein NA 318
Glyma.02G044600 hypothetical protein NA 316
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 314
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 310
Glyma.16G189000 hypothetical protein NA 308
Glyma.18G055400 hypothetical protein NA 308