Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45656 Aglain B 630.2840 631.2925 117
P45744 366.6513 367.6565 117
P53375 N(6)-Monobutyryladenosine 337.1396 338.1472 117
P53643 662.1493 663.1566 117
P54509 n2-Acetyl,n6-methyllysine 202.1324 203.1390 117
P04587 Methionyl-Glutamate 278.0937 279.1010 116
P13464 Tripterygiumine T 693.2310 694.2329 116
P17580 Swietenidin B 205.0721 206.0796 116
P22655 Candoxatrilat 399.2293 400.2366 116
P25819 Thonzylamine 286.1743 287.1822 116

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G160900 hypothetical protein NA 322
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 321
Glyma.01G173900 hypothetical protein NA 320
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 320
Glyma.03G035500 hypothetical protein NA 318
Glyma.02G044600 hypothetical protein NA 316
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 314
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 310
Glyma.16G189000 hypothetical protein NA 308
Glyma.18G055400 hypothetical protein NA 308