Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40427 Anzuroside 640.3421 641.3485 112
P41440 Thuja-2,4[10]-diene 134.1087 135.1156 112
P43015 Robustaflavone 7''-methyl ether 552.1039 553.1093 112
P46641 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 830.4901 831.4964 112
P47211 [4-((1Z)-2-(Acetylamino)-3-{[1-(1,1'-biphenyl-4-ylmethyl)-2-oxoazepan-3-YL]amino}-3-oxoprop-1-enyl)-2-formylphenyl]acetic acid 567.2412 568.2503 112
P48131 Herbarumin II 244.1302 245.1383 112
P49348 Tirandamycin C 387.2085 388.2183 112
P50908 670.3678 671.3788 112
P50943 Chilocorine A 390.2704 391.2767 112
P04365 Monascorubramine 381.1953 382.2017 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G112600 hypothetical protein NA 333
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 333
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family protein 332
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-dehydrogenase family protein 330
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 329
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 328
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 328
Glyma.11G240600 hypothetical protein NA 324
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 323
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 323