Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P44143 Spenolimycin 346.1732 347.1809 129
P46495 Maximaisoflavone B 350.1150 351.1216 129
P47071 Chondramide A 646.3320 647.3399 129
P47983 697.4235 698.4278 129
P49645 Halistanol sulfate 688.2600 689.2620 129
P51555 5,7a-Dihydro-1,4,4,7a-tetramethyl-4H-indene 174.1404 175.1465 129
P54771 Inhibitor 50 435.0802 436.0893 129
P00240 Captopril-cysteine disulfide 336.0804 337.0872 128
P06891 2,5-Dimethylfuran 96.0572 97.0644 128
P07278 435.1175 436.1265 128

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G112600 hypothetical protein NA 333
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 333
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family protein 332
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-dehydrogenase family protein 330
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 329
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 328
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 328
Glyma.11G240600 hypothetical protein NA 324
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 323
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 323