Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54666 3-Caffeoyl-4-feruloylquinic acid 530.1391 531.1460 147
P10107 Hygrocin B 507.1872 508.1911 146
P11442 Bunazosin 373.2181 374.2261 146
P15842 505.1794 506.1878 146
P20514 Pentacarboxyl porphyrinogen III 700.2711 701.2769 146
P21007 Notoamide S 435.2469 436.2553 146
P22172 593.9022 594.9029 146
P25341 Trifenmorph 329.1779 330.1831 146
P30652 Isonigerone 570.1436 571.1515 146
P31493 Clocinizine 402.1832 403.1902 146

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 355
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 354
Glyma.17G214600 hypothetical protein NA 354
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 352
Glyma.19G127500 hypothetical protein NA 352
Glyma.16G180100 hypothetical protein NA 350
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 343
Glyma.01G126800 hypothetical protein NA 341
Glyma.01G126900 hypothetical protein NA 341
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 340