Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54679 357.7333 358.7417 —
P54683 Neoacrimarine D 635.2497 636.2567 —
P54688 2,7-Dideacetyltaxuspine X 682.2954 683.3041 —
P54690 2-(Dimethylamino)acetonitrile 84.0681 85.0754 —
P54692 200.9661 201.9741 —
P54697 160.9610 161.9683 —
P54698 7-O-Acetylpseurata C 432.2164 433.2204 —
P54703 695.3327 696.3404 —
P54706 663.2964 664.3060 —
P54707 Briarlide E 636.2757 637.2796 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 355
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 354
Glyma.17G214600 hypothetical protein NA 354
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 352
Glyma.19G127500 hypothetical protein NA 352
Glyma.16G180100 hypothetical protein NA 350
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 343
Glyma.01G126800 hypothetical protein NA 341
Glyma.01G126900 hypothetical protein NA 341
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 340