Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54876 603.2250 604.2295 —
P54879 531.3880 532.3948 —
P54880 360.2884 361.2940 —
P54883 N-Linoleoyl Valine 379.3058 380.3127 —
P54893 606.8184 607.8238 —
P54895 844.0016 845.0097 —
P54899 Ligurobustoside O 622.2595 623.2642 —
P54900 606.0010 607.0054 —
P54902 NADPH 745.0835 746.0902 —
P54903 606.8463 607.8539 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 385
Glyma.08G117700 hypothetical protein NA 384
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 378
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 378
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 368
Glyma.18G045700 hypothetical protein NA 365
Glyma.16G051100 hypothetical protein NA 363
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 362
Glyma.07G068800 hypothetical protein NA 361
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 355