Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G052900 hypothetical protein NA 401
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 399
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 397
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 396
Glyma.09G054100 hypothetical protein NA 396
Glyma.14G198000 hypothetical protein NA 393
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 392
Glyma.14G094300 hypothetical protein NA 392
Glyma.13G049100 hypothetical protein NA 391
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 388