Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09497 2,5-Dimethylfuran 96.0575 97.0642 193
P10553 299.1808 300.1868 193
P18019 AH 135Y 291.1104 292.1177 193
P29144 2-Hexyl-5-methyl-3(2H)-furanone 182.1294 183.1365 193
P37333 Xanthobaccin C 494.2826 495.2901 193
P40190 Tasumatrol F 632.2808 633.2882 193
P40307 Dolaconine 419.2601 420.2671 193
P00145 Limonenecarboxylic acid 180.1121 181.1181 192
P01028 Lamiridosin A 260.0890 261.0946 192
P03908 438.5879 439.5923 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G052900 hypothetical protein NA 401
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 399
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 397
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 396
Glyma.09G054100 hypothetical protein NA 396
Glyma.14G198000 hypothetical protein NA 393
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 392
Glyma.14G094300 hypothetical protein NA 392
Glyma.13G049100 hypothetical protein NA 391
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 388