Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13499 2-Aminoindan 133.0884 134.0953 109
P16011 Dibenzo-P-dioxin 402.1820 403.1913 109
P16450 Herbarumin II 244.1296 245.1355 109
P17257 Clibadiolide 778.3857 779.3905 109
P19615 Biapenem 350.1055 351.1144 109
P20371 694.0848 695.0881 109
P21143 U 77802 820.2298 821.2375 109
P22945 Saframycin B 537.2019 538.2138 109
P25648 Triamcinolone hexacetonide 532.2833 533.2898 109
P29256 Annulatophenonoside 408.1070 409.1124 109

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G052900 hypothetical protein NA 401
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 399
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 397
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 396
Glyma.09G054100 hypothetical protein NA 396
Glyma.14G198000 hypothetical protein NA 393
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 392
Glyma.14G094300 hypothetical protein NA 392
Glyma.13G049100 hypothetical protein NA 391
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 388