Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04174 Mesifurane 142.0615 143.0689 125
P07352 Benzoxazole 119.0351 120.0432 125
P14288 N-[2-(4-Prenyloxyphenyl)ethyl]tiglamide 287.1828 288.1891 125
P16266 Fibraurinoside 534.1755 535.1865 125
P19931 N-Despropyl-rotigotine 273.1184 274.1254 125
P20138 Antibiotic KA 7367B 200.1542 201.1617 125
P20173 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.2006 607.2079 125
P20356 Cochinchinenin 514.2035 515.2126 125
P20898 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1238 173.1309 125
P30615 384.6477 385.6534 125

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G052900 hypothetical protein NA 401
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 399
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 397
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 396
Glyma.09G054100 hypothetical protein NA 396
Glyma.14G198000 hypothetical protein NA 393
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 392
Glyma.14G094300 hypothetical protein NA 392
Glyma.13G049100 hypothetical protein NA 391
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 388