Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23907 968.2928 969.3031 132
P26825 850.3598 851.3632 132
P30950 14-Hydroxycathovaline 442.2134 443.2199 132
P33509 2-Hydroxy-6-oxo-6-(2-hydroxyphenoxy)-hexa-2,4-dienoate 250.0469 251.0549 132
P34626 Microtoenin C 941.5073 942.5094 132
P55525 271.1993 272.2052 132
P04118 9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one 292.0726 293.0816 131
P06579 4-O-Methylascochlorin 418.1920 419.1981 131
P07063 Suffruticoside E 622.2095 623.2178 131
P08863 428.0566 429.0641 131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G052900 hypothetical protein NA 401
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 399
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 397
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 396
Glyma.09G054100 hypothetical protein NA 396
Glyma.14G198000 hypothetical protein NA 393
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 392
Glyma.14G094300 hypothetical protein NA 392
Glyma.13G049100 hypothetical protein NA 391
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 388