Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55049 Xylaroside B 328.1519 329.1600 —
P55052 284.2780 285.2841 —
P55053 600.7683 601.7714 —
P55057 Cephasugine 347.1721 348.1791 —
P55059 3-Methylnonanoylcarnitine 315.2432 316.2523 —
P55060 265.1400 266.1458 —
P55061 3Z,6Z,9Z-Octadecatriene 248.2467 249.2551 —
P55062 ES 242-1 604.2300 605.2419 —
P55063 Nandrolone phenpropionate 406.2498 407.2583 —
P55064 Yuccaol A 496.1147 497.1224 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G147400 hypothetical protein NA 413
Glyma.16G121400 hypothetical protein NA 410
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 410
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 410
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 408
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 405
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 404
Glyma.08G112600 hypothetical protein NA 402
Glyma.16G050900 COL16 NA 402
Glyma.08G112700 hypothetical protein NA 401