Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54757 stigmast-5-en-3beta-yl (3E-pentenoate) 496.4182 497.4269 —
P54758 Ser-Leu-Ile-Gly-Lys-Val 615.4030 616.4081 —
P54762 Crambescin A 448.3499 449.3575 —
P54764 Sodwanone B 484.3229 485.3327 —
P54765 Limonenecarboxylic acid 180.1139 181.1211 —
P54766 Benzanthrin A 634.2907 635.2923 —
P54767 Viburtinal 160.0510 161.0590 —
P54768 Ajugapantin A 550.2417 551.2507 —
P54775 113.9490 114.9570 —
P54777 Sideretin 224.0327 225.0403 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G147400 hypothetical protein NA 413
Glyma.16G121400 hypothetical protein NA 410
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 410
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 410
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 408
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 405
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 404
Glyma.08G112600 hypothetical protein NA 402
Glyma.16G050900 COL16 NA 402
Glyma.08G112700 hypothetical protein NA 401