Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32742 4,4'-Diapo-psi,psi-Carotenedioic acid mono-beta-D-glucopyranosyl ester 622.3172 623.3275 107
P33926 Cyclolinopeptide K 1089.5803 1090.5866 107
P36950 Istamycin AO 337.1843 338.1930 107
P37125 912.3493 913.3510 107
P37429 Dihydrotetrodecamycin 336.1566 337.1626 107
P39006 Dermorphin 802.3633 803.3714 107
P39715 Soyasaponin aa 1054.5351 1055.5439 107
P41862 m-Trigallic acid 474.0438 475.0510 107
P42153 Candidin 921.4826 922.4875 107
P42536 N-Methoxyspirobrassinol 282.0505 565.1102 107

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G147400 hypothetical protein NA 413
Glyma.16G121400 hypothetical protein NA 410
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 410
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 410
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 408
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 405
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 404
Glyma.08G112600 hypothetical protein NA 402
Glyma.16G050900 COL16 NA 402
Glyma.08G112700 hypothetical protein NA 401