Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13650 Dibalanocarpol 938.2662 939.2698 111
P14056 2-Oxo-8-methylthiooctanoic acid 204.0819 205.0892 111
P14846 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0667 136.0746 111
P16984 N-D-Glucosylarylamine 255.1088 256.1158 111
P17883 587.8008 588.8095 111
P18890 Rhamnetin 3-rhamnosyl-(1->3)(4'''-acetylrhamnosyl)(1->6)-galactoside 812.2394 813.2447 111
P20995 Renieramycin R 605.2442 606.2541 111
P25679 Citronellate 170.1291 171.1358 111
P27806 Fenoverine 459.1623 460.1680 111
P28252 Hypochoeroside K 398.2271 399.2333 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 417
Glyma.01G125400 hypothetical protein NA 417
Glyma.01G125500 hypothetical protein NA 417
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 417
Glyma.01G126300 hypothetical protein NA 417
Glyma.01G126400 hypothetical protein NA 417
Glyma.01G126500 hypothetical protein NA 417
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 416
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 415
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 415