Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09995 Daphniyunnine D 341.2004 342.2073 167
P10528 Etoperidone 377.1934 378.2001 167
P18446 1080.3689 1081.3767 167
P22504 Swietenidin B 205.0736 206.0805 167
P30111 Trifoliolasine D 783.2994 784.3081 167
P30296 1006.3388 1007.3447 167
P35381 898.3478 899.3586 167
P38138 Semapimod 744.4382 745.4471 167
P41379 11-Hydroxy-9-tridecenoic acid 228.1769 229.1859 167
P43251 Auriculatin 420.1577 421.1647 167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 430
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box transcription factor family protein 429
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 429
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 427
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 427
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 423
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 423
Glyma.06G260900 hypothetical protein NA 421
Glyma.01G045400 hypothetical protein NA 418
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 418