Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13475 594.1775 595.1805 108
P14241 201.0613 202.0698 108
P14315 Minwanensin 284.1580 285.1661 108
P14914 539.6069 540.6145 108
P17163 3',4'-Dihydroxy-7-methoxy-8-(3-methylbut-2-enyl)-2'''-(1-hydroxy-1-methylethyl)-furano-(4'',5'':6,5)favanone 452.1782 453.1867 108
P17316 Camicinal 424.2651 425.2723 108
P19987 Juncin K 706.3311 707.3423 108
P20676 3,4,7-Trihydroxy-5-methoxy-8-prenylflavan 4-O-(beta-D-xylopyranosyl-(1->6)-beta-D-glucopyranoside) 666.2435 667.2535 108
P21070 Guvacoline 141.0788 142.0851 108
P21615 4-[(E)-2-(7-Heptoxy-4,4-dimethyl-1,1-dioxo-2,3-dihydrothiochromen-6-yl)prop-1-enyl]benzoic acid 484.2258 485.2336 108

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 430
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box transcription factor family protein 429
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 429
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 427
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 427
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 423
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 423
Glyma.06G260900 hypothetical protein NA 421
Glyma.01G045400 hypothetical protein NA 418
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 418