Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35545 616.8018 617.8091 123
P36889 Cyanazine 240.0879 241.0955 123
P37209 2,3-di-O-hexanoyl-alpha-glucopyranose 376.2115 377.2181 123
P37987 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1463 811.4444 123
P41869 Scutebarbatine H 469.2026 470.2090 123
P43011 1080.0249 1081.0336 123
P43202 3R-undecanoyloxy-2R-hydroxy-4-methylpentanoic acid methyl ester 330.2375 331.2444 123
P46986 Butyl oleate sulfate 434.2692 435.2782 123
P48228 Valerylfentanyl 364.2459 365.2510 123
P03650 4-Sinapoylquinic acid 398.1211 399.1261 122

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 430
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box transcription factor family protein 429
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 429
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 427
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 427
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 423
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 423
Glyma.06G260900 hypothetical protein NA 421
Glyma.01G045400 hypothetical protein NA 418
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 418