Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P17402 Stenopalustroside E 966.2688 967.2721 340
P22371 352.6573 353.6630 314
P13413 (4-Ethylnaphthalen-1-yl)[1-(5-fluoropentyl)-1H-indol-3-yl]methanone 387.2022 388.2077 311
P13744 Mutangin 636.2571 637.2635 310
P40835 Gnidicin-20-palmitate 866.4613 867.4696 309
P42556 Arboreaside B 1104.5548 1105.5612 304
P16221 Ganomastenol C 254.1849 255.1926 299
P15142 521.2481 522.2554 297
P34561 818.1767 819.1780 295
P00008 281.8737 282.8810 292

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G121800 hypothetical protein NA 3,117
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 3,095
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 3,091
Glyma.13G135300 hypothetical protein NA 3,024
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 3,024
Glyma.16G117400 hypothetical protein NA 3,001
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 2,989
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 2,919
Glyma.16G119400 hypothetical protein NA 2,832
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 2,739