Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54129 Humilinolide F 684.2723 685.2815 —
P54139 Norplicacetin 503.2367 504.2429 —
P54143 Arterolane 392.2651 393.2726 —
P54148 Nemifitide 694.3336 695.3409 —
P54150 Validamycin A 497.2145 498.2231 —
P54154 605.9010 606.9065 —
P54155 Fusicogigantone B 304.2387 305.2449 —
P54159 188.9923 190.0004 —
P54160 607.0585 608.0672 —
P54162 Benz(cd)indole-6-carboxamide, 4-(dipropylamino)-1,3,4,5-tetrahydro- 299.2013 599.4090 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G121800 hypothetical protein NA 3,117
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 3,095
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 3,091
Glyma.13G135300 hypothetical protein NA 3,024
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 3,024
Glyma.16G117400 hypothetical protein NA 3,001
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 2,989
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 2,919
Glyma.16G119400 hypothetical protein NA 2,832
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 2,739