Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40497 Cannabisin E 642.2624 643.2723 98
P41219 205.5188 206.5254 98
P41611 985.5068 986.5134 98
P42930 1945.0318 973.5269 98
P43774 Brivanib 370.1437 371.1524 98
P44836 Bengamide E 358.2101 359.2163 98
P49563 Dabigatran 471.2041 472.2098 98
P50302 1,2-Bis(6-methoxy-1h-benzimidazol-2-yl)ethane-1,2-diol 354.1329 355.1391 98
P50489 10-Hydroxy-cadin-4-en-3-one 236.1742 237.1822 98
P52806 Matteuorienate C 588.1799 589.1876 98

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G121800 hypothetical protein NA 3,117
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 3,095
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 3,091
Glyma.13G135300 hypothetical protein NA 3,024
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 3,024
Glyma.16G117400 hypothetical protein NA 3,001
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 2,989
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 2,919
Glyma.16G119400 hypothetical protein NA 2,832
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 2,739