Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41500 2-Isopropylfuran 110.0721 221.1512 100
P44096 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0975 309.2029 100
P48025 Isocitral 152.1188 305.2436 100
P48657 6E,11Z-hexadecadien-1-ol 238.2269 239.2334 100
P55136 Dictyopterene C' 150.1394 151.1472 100
P12435 Gliovictin 354.1082 355.1158 99
P13123 4-Amino-4-deoxychorismate 225.0629 226.0705 99
P13911 Fisetinidol-(4alpha->8)-catechin-3-O-gallate 714.1565 715.1685 99
P14786 1194.3970 1195.4059 99
P16774 3-Methylphenylacetic acid 150.0687 151.0766 99

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G121800 hypothetical protein NA 3,117
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 3,095
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 3,091
Glyma.13G135300 hypothetical protein NA 3,024
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 3,024
Glyma.16G117400 hypothetical protein NA 3,001
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 2,989
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 2,919
Glyma.16G119400 hypothetical protein NA 2,832
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 2,739