Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40267 90720A 1040.4818 1041.4942 101
P40439 LysoPC(18:3(6Z,9Z,12Z)/0:0) 517.3124 518.3206 101
P41335 Manumycin A 550.2719 551.2807 101
P41614 (-)-Mehranine 310.2084 311.2157 101
P42130 PIP(18:2(10E,12Z)+=O(9)/20:2(11Z,14Z)) 980.5129 981.5213 101
P44523 3-[[2-(2-Benzoyl-N-[2-[(2-methylpropan-2-yl)oxy]-2-oxoethyl]anilino)-2-oxoethyl]carbamoylamino]benzoic acid 531.2013 532.2104 101
P52281 Albovionitine 389.2567 390.2634 101
P52302 7-Oxononane-1,1,9-tricarbaldehyde 226.1203 227.1264 101
P52372 cis-5-Tetradecenoylcarnitine 369.2922 370.2954 101
P52606 Jietacin B 324.2814 325.2884 101

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G121800 hypothetical protein NA 3,117
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 3,095
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 3,091
Glyma.13G135300 hypothetical protein NA 3,024
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 3,024
Glyma.16G117400 hypothetical protein NA 3,001
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 2,989
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 2,919
Glyma.16G119400 hypothetical protein NA 2,832
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 2,739